Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 MIR4741-201ENST00000579822 90 ntBASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 RN7SL219P-201ENST00000582872 296 ntBASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 AC007191.1-201ENST00000623179 2995 ntBASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 AC005912.2-201ENST00000619492 2400 ntBASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL4A3BPQ9Y5P4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CNN2P10-201ENST00000443067 918 ntBASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 C2orf69P2-201ENST00000562032 1123 ntBASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 MIR4538-201ENST00000581377 78 ntBASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CLUHP2-201ENST00000426660 1303 ntBASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL4A3BPQ9Y5P4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 MIR600HG-201ENST00000449175 5984 ntBASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AC126755.1-201ENST00000525846 6405 ntBASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL4A3BPQ9Y5P4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms