Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CALR4P-201ENST00000431943 946 ntBASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHB1Q9Y5F3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ELK2AP-201ENST00000392510 1007 ntBASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AC026434.2-201ENST00000506094 1078 ntBASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHB1Q9Y5F3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms