Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 POM121L8P-201ENST00000417732 1281 ntBASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 POM121L9P-203ENST00000441984 1285 ntBASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 CSF2RBP1-201ENST00000447905 391 ntBASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.26□□□□□ -0.13
HCN3Q9P1Z3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 AHCYP2-201ENST00000430630 1300 ntBASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 AC006001.1-201ENST00000325130 474 ntBASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 AC006453.4-201ENST00000636949 1252 ntBASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HCN3Q9P1Z3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms