Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AL139094.1-201ENST00000405549 1188 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC134915.1-201ENST00000426461 574 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC093004.1-201ENST00000508850 424 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 SPDYE18-201ENST00000510091 1050 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC022616.1-201ENST00000518688 554 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 DUX4L47-201ENST00000566374 394 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 AL390955.2-201ENST00000603032 514 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 MST1P2-201ENST00000457982 2291 ntBASIC14.1□□□□□ -0.15
THUMPD1Q9NXG2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 INTS4P2-202ENST00000614726 2019 ntBASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 TLE1P1-201ENST00000422965 589 ntBASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 AC104794.3-201ENST00000566840 1248 ntBASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
THUMPD1Q9NXG2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
THUMPD1Q9NXG2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.08□□□□□ -0.15
THUMPD1Q9NXG2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms