Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 PRSS30P-206ENST00000641773 873 ntBASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMBRD1Q9NUN5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AC126755.1-201ENST00000525846 6405 ntBASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AC092337.1-201ENST00000568699 1129 ntBASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AC107373.2-201ENST00000607735 490 ntBASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AC003102.2-201ENST00000589195 1469 ntBASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 SALL4P5-201ENST00000419001 1760 ntBASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMBRD1Q9NUN5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AP000344.2-201ENST00000512987 629 ntBASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AC026410.3-201ENST00000514280 936 ntBASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AL512356.2-201ENST00000546955 174 ntBASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 MIR4469-201ENST00000583919 79 ntBASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 AL136172.1-201ENST00000598590 1394 ntBASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMBRD1Q9NUN5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms