Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CTH-203ENST00000411986 2044 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 AC112176.1-201ENST00000565428 3024 ntBASIC17.87■□□□□ 0.45
RTN4Q9NQC3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTN4Q9NQC3 TP53-201ENST00000269305 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TP53-226ENST00000620739 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 PADI4-201ENST00000375448 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AC073335.2-201ENST00000610177 3441 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AC093724.1-201ENST00000448659 1027 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 UNC93B7-201ENST00000509439 705 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 ELL2P2-201ENST00000515135 694 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AC099521.2-201ENST00000619354 2036 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 AL162456.1-201ENST00000634535 2006 ntBASIC17.86■□□□□ 0.45
RTN4Q9NQC3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RTN4Q9NQC3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 MIR1224-201ENST00000408193 85 ntBASIC17.85■□□□□ 0.45
RTN4Q9NQC3 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 RNU6-751P-201ENST00000516382 101 ntBASIC17.85■□□□□ 0.45
RTN4Q9NQC3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms