Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC152010.1-201ENST00000415779 2006 ntBASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 CLUHP6-201ENST00000580789 941 ntBASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 AC133539.2-201ENST00000604757 467 ntBASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
UPF3BQ9BZI7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 GRK6P1-201ENST00000400595 1711 ntBASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AC114812.1-204ENST00000449669 728 ntBASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 TPT1P11-201ENST00000458482 498 ntBASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AC136759.1-202ENST00000530858 2194 ntBASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 AGGF1P1-201ENST00000509500 2073 ntBASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 MSTO2P-201ENST00000314835 1709 ntBASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPF3BQ9BZI7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms