Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 MIR632-201ENST00000385193 94 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC019109.1-201ENST00000401725 1874 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 RN7SL351P-201ENST00000469306 248 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC005332.2-201ENST00000590010 930 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC113385.2-201ENST00000614465 762 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC026336.4-201ENST00000624565 1050 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 GUCY2EP-203ENST00000531117 1918 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 ODCP-201ENST00000459650 1639 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 BRD7P5-201ENST00000299197 1822 ntBASIC14.62□□□□□ -0.07
COL25A1Q9BXS0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 SNORD88B-201ENST00000408454 91 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 DNM1P46-202ENST00000415963 882 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC012513.2-201ENST00000441511 1137 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 RNA5SP288-201ENST00000516075 93 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AL049840.2-201ENST00000602722 535 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC091769.1-201ENST00000619576 568 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC245369.8-201ENST00000636589 306 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AC093503.3-201ENST00000624917 2352 ntBASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
COL25A1Q9BXS0 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 KRT18P40-201ENST00000599859 1571 ntBASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL25A1Q9BXS0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms