Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.31□□□□□ -0.28
VRK1Q99986 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VRK1Q99986 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.31□□□□□ -0.28
VRK1Q99986 CICP20-201ENST00000443330 2801 ntBASIC13.31□□□□□ -0.28
VRK1Q99986 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.3□□□□□ -0.28
VRK1Q99986 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.3□□□□□ -0.28
VRK1Q99986 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.3□□□□□ -0.28
VRK1Q99986 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.3□□□□□ -0.28
VRK1Q99986 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.3□□□□□ -0.28
VRK1Q99986 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.3□□□□□ -0.28
VRK1Q99986 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 AL512343.1-201ENST00000605837 169 ntBASIC13.3□□□□□ -0.28
VRK1Q99986 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VRK1Q99986 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VRK1Q99986 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
VRK1Q99986 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
VRK1Q99986 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.29□□□□□ -0.28
VRK1Q99986 MIR1909-201ENST00000411312 80 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VRK1Q99986 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
VRK1Q99986 ENPP7P5-201ENST00000541031 1031 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
VRK1Q99986 PTP4A1P2-201ENST00000546033 454 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.29□□□□□ -0.28
VRK1Q99986 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.29□□□□□ -0.28
VRK1Q99986 AC120045.2-201ENST00000567334 178 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 BTNL10-201ENST00000595971 695 ntBASIC13.29□□□□□ -0.28
VRK1Q99986 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.29□□□□□ -0.28
VRK1Q99986 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VRK1Q99986 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms