Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 FDPSP7-201ENST00000429043 1054 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 HLA-K-203ENST00000430151 1046 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AC092580.1-201ENST00000433998 658 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 MIR6720-201ENST00000611664 98 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 MIR6893-201ENST00000613458 69 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 LINC00528-201ENST00000600723 2160 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 CYP2T1P-202ENST00000641596 2535 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AC015912.3-201ENST00000619432 348 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC097359.2-201ENST00000604992 2389 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 NF1P11-201ENST00000621292 1282 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC112693.3-201ENST00000624819 1983 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 PYY2-201ENST00000315776 282 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 CFL1P6-201ENST00000400899 494 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 KRT8P30-201ENST00000432100 650 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AP006248.1-201ENST00000610471 67 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 AC006986.1-201ENST00000612764 241 ntBASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CSMD1Q96PZ7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 OR10N1P-201ENST00000392758 869 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 DPY19L2P5-201ENST00000456300 331 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 SLC25A15P1-201ENST00000456738 342 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 SLC25A15P3-201ENST00000505530 290 ntBASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.37□□□□□ -0.43
CSMD1Q96PZ7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms