Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF34Q969K3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF34Q969K3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF34Q969K3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RNF34Q969K3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF34Q969K3 MIR1909-201ENST00000411312 80 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF34Q969K3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF34Q969K3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF34Q969K3 AC078819.1-201ENST00000547454 765 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 AC012085.1-201ENST00000548270 765 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF34Q969K3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF34Q969K3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF34Q969K3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF34Q969K3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF34Q969K3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF34Q969K3 AC133552.6-201ENST00000613406 534 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 MIR6775-201ENST00000617557 69 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 RHOXF1P1-202ENST00000635473 501 ntBASIC15.66■□□□□ 0.1
RNF34Q969K3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF34Q969K3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF34Q969K3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF34Q969K3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF34Q969K3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF34Q969K3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC092053.3-201ENST00000641308 4975 ntBASIC15.65■□□□□ 0.1
RNF34Q969K3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF34Q969K3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 CNN2P8-201ENST00000421872 913 ntBASIC15.65■□□□□ 0.1
RNF34Q969K3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF34Q969K3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF34Q969K3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF34Q969K3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF34Q969K3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF34Q969K3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RNF34Q969K3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF34Q969K3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RNF34Q969K3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
RNF34Q969K3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF34Q969K3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF34Q969K3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms