Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 FAM21EP-201ENST00000417804 985 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 VENTXP4-201ENST00000449029 958 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AP003040.1-201ENST00000532044 1024 ntBASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC9.69□□□□□ -0.86
ALMS1Q8TCU4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 CICP13-201ENST00000422015 2789 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 MVK-217ENST00000639206 367 ntTSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AC006504.5-208ENST00000588784 2401 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AL133467.4-201ENST00000602953 725 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AL050341.2-201ENST00000567508 1541 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 PCDHGB8P-201ENST00000502926 1973 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 BX088651.3-201ENST00000418155 352 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 KRT18P62-201ENST00000446618 1287 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 RHOQP2-201ENST00000449922 579 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AC078814.4-201ENST00000546650 327 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 RN7SL300P-201ENST00000582522 318 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 NF1P11-201ENST00000621292 1282 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 AC079328.2-201ENST00000561241 3354 ntBASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC9.68□□□□□ -0.86
ALMS1Q8TCU4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AL157823.1-201ENST00000403727 628 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 OR51A9P-201ENST00000422578 911 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 ANKRD26P1-203ENST00000569528 966 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PDXDC2P-206ENST00000534700 1315 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms