Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH19Q8TAB3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
PCDH19Q8TAB3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 LINC01230-201ENST00000625222 3017 ntBASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 FTLP10-202ENST00000505798 471 ntBASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 AC132938.4-201ENST00000623835 848 ntBASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 FKBP4P6-201ENST00000457486 1332 ntBASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 MRPL37P1-201ENST00000592451 1337 ntBASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 HSPA7-201ENST00000445535 1927 ntBASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDH19Q8TAB3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CROCCP4-201ENST00000457096 498 ntBASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 ECM1P1-201ENST00000604092 1279 ntBASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH19Q8TAB3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms