Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLHC1Q8NHS4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 RNU1-114P-201ENST00000365297 166 ntBASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 UGT1A2P-201ENST00000454886 866 ntBASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AC093813.1-201ENST00000605066 256 ntBASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLHC1Q8NHS4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC152010.1-201ENST00000415779 2006 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC055811.4-201ENST00000624039 1754 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AL645937.2-201ENST00000396808 931 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC134915.1-201ENST00000426461 574 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 RPL13AP25-201ENST00000484130 612 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 RFPL4AP1-201ENST00000530883 850 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC007431.3-201ENST00000623221 587 ntBASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.38□□□□□ -0.11
CLHC1Q8NHS4 AC136759.1-202ENST00000530858 2194 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms