Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AC079781.5-202ENST00000641784 3743 ntBASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AC007787.1-201ENST00000588095 1583 ntBASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 AC006504.5-208ENST00000588784 2401 ntBASIC12.76□□□□□ -0.37
CLDND2Q8NHS1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 TPM3P8-201ENST00000330554 643 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 AL645937.2-201ENST00000396808 931 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 AL139094.1-201ENST00000405549 1188 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 ECM1P1-201ENST00000604092 1279 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 AC091271.1-201ENST00000611877 1162 ntBASIC12.75□□□□□ -0.37
CLDND2Q8NHS1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms