Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 AC133539.2-201ENST00000604757 467 ntBASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 LRRC59-203ENST00000576448 1531 ntBASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AL354702.1-201ENST00000442006 1960 ntBASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC026434.2-201ENST00000506094 1078 ntBASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC022616.1-201ENST00000518688 554 ntBASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 LINC02560-201ENST00000596379 459 ntBASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC008494.3-201ENST00000606615 944 ntBASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 AC005252.2-201ENST00000624630 1141 ntBASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00346Q8IVM7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms