Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 AC013726.1-201ENST00000563747 2285 ntBASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD4Q5XG99 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PRORSD1P-202ENST00000563365 2154 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 HIST2H2BA-201ENST00000412169 381 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 ORAOV1P1-201ENST00000503108 395 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 MIR3180-2-201ENST00000581748 88 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 MIR6756-201ENST00000616240 63 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 AC009560.1-201ENST00000620208 434 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 AC005618.3-201ENST00000624928 458 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 AC067930.6-201ENST00000623257 4947 ntBASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD4Q5XG99 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 OR2R1P-201ENST00000441404 914 ntBASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 RN7SL470P-201ENST00000583069 259 ntBASIC14.46□□□□□ -0.09
LYSMD4Q5XG99 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms