Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 AL158070.2-201ENST00000623713 1621 ntBASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC00242Q5T6M2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AC015818.8-201ENST00000587907 1519 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 DMBT1P1-203ENST00000636837 4628 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 HLA-V-204ENST00000476601 1289 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 GAPDHP40-201ENST00000505218 1006 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AP000344.2-201ENST00000512987 629 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AC010336.2-201ENST00000564226 506 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AC051619.7-201ENST00000568314 623 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AC004835.2-201ENST00000603762 682 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 AP001059.3-201ENST00000619053 235 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 PPT1-213ENST00000641319 2388 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 CICP20-201ENST00000443330 2801 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 CICP16-201ENST00000502609 2813 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 RN7SL832P-201ENST00000607781 1756 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 KRT8P14-201ENST00000414254 1442 ntBASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC00242Q5T6M2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LINC00242Q5T6M2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms