Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.93■□□□□ 0.14
CDR2Q01850 AC145423.3-201ENST00000615987 467 ntBASIC15.93■□□□□ 0.14
CDR2Q01850 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.93■□□□□ 0.14
CDR2Q01850 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.93■□□□□ 0.14
CDR2Q01850 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CDR2Q01850 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.93■□□□□ 0.14
CDR2Q01850 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.93■□□□□ 0.14
CDR2Q01850 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.93■□□□□ 0.14
CDR2Q01850 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDR2Q01850 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDR2Q01850 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.92■□□□□ 0.14
CDR2Q01850 HSPA7-201ENST00000445535 1927 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.92■□□□□ 0.14
CDR2Q01850 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.92■□□□□ 0.14
CDR2Q01850 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.92■□□□□ 0.14
CDR2Q01850 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 RN7SKP230-201ENST00000365642 335 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CDR2Q01850 AP006294.1-201ENST00000415407 339 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 HMGN1P19-201ENST00000436976 333 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 AC245100.3-201ENST00000441281 285 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
CDR2Q01850 AC131206.1-201ENST00000538078 1211 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 PTP4A1P2-201ENST00000546033 454 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.92■□□□□ 0.14
CDR2Q01850 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.92■□□□□ 0.14
CDR2Q01850 AC010319.3-201ENST00000597028 470 ntBASIC15.92■□□□□ 0.14
CDR2Q01850 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.92■□□□□ 0.14
CDR2Q01850 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.92■□□□□ 0.14
CDR2Q01850 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CDR2Q01850 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDR2Q01850 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDR2Q01850 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDR2Q01850 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.91■□□□□ 0.14
CDR2Q01850 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 POM121L8P-201ENST00000417732 1281 ntBASIC15.91■□□□□ 0.14
CDR2Q01850 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 POM121L9P-203ENST00000441984 1285 ntBASIC15.91■□□□□ 0.14
CDR2Q01850 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.91■□□□□ 0.14
CDR2Q01850 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDR2Q01850 AC068587.3-201ENST00000526613 355 ntBASIC15.91■□□□□ 0.14
CDR2Q01850 TDH-203ENST00000531764 1110 ntBASIC15.91■□□□□ 0.14
CDR2Q01850 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.91■□□□□ 0.14
CDR2Q01850 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDR2Q01850 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms