Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SEC61A1P61619 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 Z97205.2-201ENST00000564697 1639 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC61A1P61619 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SEC61A1P61619 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC61A1P61619 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC61A1P61619 SLC7A15P-201ENST00000424028 1363 ntBASIC13.19□□□□□ -0.3
SEC61A1P61619 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC61A1P61619 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.18□□□□□ -0.3
SEC61A1P61619 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.18□□□□□ -0.3
SEC61A1P61619 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.18□□□□□ -0.3
SEC61A1P61619 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
SEC61A1P61619 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.18□□□□□ -0.3
SEC61A1P61619 AL596325.1-201ENST00000563991 1082 ntBASIC13.18□□□□□ -0.3
SEC61A1P61619 AC092337.1-201ENST00000568699 1129 ntBASIC13.18□□□□□ -0.3
SEC61A1P61619 AC027307.3-201ENST00000594262 1100 ntBASIC13.18□□□□□ -0.3
SEC61A1P61619 AC239800.4-201ENST00000603712 296 ntBASIC13.18□□□□□ -0.3
SEC61A1P61619 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SEC61A1P61619 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SEC61A1P61619 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC61A1P61619 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 AC097359.2-201ENST00000604992 2389 ntBASIC13.17□□□□□ -0.3
SEC61A1P61619 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.17□□□□□ -0.3
SEC61A1P61619 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 DGCR5-201ENST00000399539 862 ntBASIC13.17□□□□□ -0.3
SEC61A1P61619 KRT18P64-201ENST00000434946 1219 ntBASIC13.17□□□□□ -0.3
SEC61A1P61619 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.17□□□□□ -0.3
SEC61A1P61619 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 AC055876.2-201ENST00000531834 546 ntBASIC13.17□□□□□ -0.3
SEC61A1P61619 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms