Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 RN7SKP175-201ENST00000408472 289 ntBASIC11.11□□□□□ -0.63
CMC4P56277 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 HLA-V-201ENST00000429037 534 ntBASIC11.11□□□□□ -0.63
CMC4P56277 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.11□□□□□ -0.63
CMC4P56277 AC244107.1-201ENST00000442033 332 ntBASIC11.11□□□□□ -0.63
CMC4P56277 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CMC4P56277 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
CMC4P56277 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CMC4P56277 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.11□□□□□ -0.63
CMC4P56277 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CMC4P56277 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CMC4P56277 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CMC4P56277 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CMC4P56277 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.1□□□□□ -0.63
CMC4P56277 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 AC092135.3-201ENST00000624151 1846 ntBASIC11.1□□□□□ -0.63
CMC4P56277 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.1□□□□□ -0.63
CMC4P56277 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.1□□□□□ -0.63
CMC4P56277 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 CNN2P10-201ENST00000443067 918 ntBASIC11.1□□□□□ -0.63
CMC4P56277 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.1□□□□□ -0.63
CMC4P56277 AL391280.1-201ENST00000506969 1062 ntBASIC11.1□□□□□ -0.63
CMC4P56277 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 AC131206.1-201ENST00000538078 1211 ntBASIC11.1□□□□□ -0.63
CMC4P56277 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.1□□□□□ -0.63
CMC4P56277 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.1□□□□□ -0.63
CMC4P56277 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.1□□□□□ -0.63
CMC4P56277 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 AL136172.1-201ENST00000598590 1394 ntBASIC11.1□□□□□ -0.63
CMC4P56277 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms