Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.18□□□□□ -0.14
GFERP55789 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
GFERP55789 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 AL157407.1-201ENST00000435784 904 ntBASIC14.18□□□□□ -0.14
GFERP55789 Z97180.1-201ENST00000445173 988 ntBASIC14.18□□□□□ -0.14
GFERP55789 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.18□□□□□ -0.14
GFERP55789 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.18□□□□□ -0.14
GFERP55789 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 AC009884.2-201ENST00000603110 324 ntBASIC14.18□□□□□ -0.14
GFERP55789 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GFERP55789 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.18□□□□□ -0.14
GFERP55789 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.18□□□□□ -0.14
GFERP55789 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.18□□□□□ -0.14
GFERP55789 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GFERP55789 TCAF2P1-201ENST00000291129 2421 ntBASIC14.17□□□□□ -0.14
GFERP55789 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.17□□□□□ -0.14
GFERP55789 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GFERP55789 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.17□□□□□ -0.14
GFERP55789 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GFERP55789 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
GFERP55789 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.17□□□□□ -0.14
GFERP55789 AL008707.1-201ENST00000422498 534 ntBASIC14.17□□□□□ -0.14
GFERP55789 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 AL645933.1-201ENST00000440087 609 ntBASIC14.17□□□□□ -0.14
GFERP55789 UPF3AP2-201ENST00000457924 1132 ntBASIC14.17□□□□□ -0.14
GFERP55789 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.17□□□□□ -0.14
GFERP55789 RCC2P8-201ENST00000502779 1035 ntBASIC14.17□□□□□ -0.14
GFERP55789 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 AC245884.6-201ENST00000515672 1067 ntBASIC14.17□□□□□ -0.14
GFERP55789 RNA5SP423-201ENST00000517127 109 ntBASIC14.17□□□□□ -0.14
GFERP55789 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.17□□□□□ -0.14
GFERP55789 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.17□□□□□ -0.14
GFERP55789 AC091812.3-201ENST00000621362 345 ntBASIC14.17□□□□□ -0.14
GFERP55789 CU633904.3-201ENST00000624042 1029 ntBASIC14.17□□□□□ -0.14
GFERP55789 AC100757.4-201ENST00000626934 759 ntBASIC14.17□□□□□ -0.14
GFERP55789 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 AC023157.3-201ENST00000619086 2088 ntBASIC14.17□□□□□ -0.14
GFERP55789 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
GFERP55789 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.17□□□□□ -0.14
GFERP55789 FAM90A7P-201ENST00000382628 1395 ntBASIC14.17□□□□□ -0.14
GFERP55789 FAM90A23P-201ENST00000400136 1395 ntBASIC14.17□□□□□ -0.14
GFERP55789 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.17□□□□□ -0.14
GFERP55789 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
GFERP55789 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFERP55789 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms