Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH13P55290 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 RNU1-114P-201ENST00000365297 166 ntBASIC14.65□□□□□ -0.06
CDH13P55290 C1QBPP1-201ENST00000400117 770 ntBASIC14.65□□□□□ -0.06
CDH13P55290 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH13P55290 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH13P55290 AC026434.2-201ENST00000506094 1078 ntBASIC14.65□□□□□ -0.06
CDH13P55290 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH13P55290 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.65□□□□□ -0.06
CDH13P55290 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH13P55290 DUX4L47-201ENST00000566374 394 ntBASIC14.65□□□□□ -0.06
CDH13P55290 RRP7BP-205ENST00000566851 833 ntBASIC14.65□□□□□ -0.06
CDH13P55290 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.65□□□□□ -0.06
CDH13P55290 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH13P55290 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH13P55290 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH13P55290 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH13P55290 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
CDH13P55290 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
CDH13P55290 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDH13P55290 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.64□□□□□ -0.07
CDH13P55290 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH13P55290 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 AC104596.2-201ENST00000512793 793 ntBASIC14.64□□□□□ -0.07
CDH13P55290 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH13P55290 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 AL359711.2-201ENST00000563105 872 ntBASIC14.64□□□□□ -0.07
CDH13P55290 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH13P55290 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDH13P55290 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH13P55290 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDH13P55290 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDH13P55290 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 PTENP1-202ENST00000532280 3996 ntBASIC14.64□□□□□ -0.07
CDH13P55290 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH13P55290 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH13P55290 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH13P55290 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH13P55290 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH13P55290 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CDH13P55290 SLC7A15P-201ENST00000424028 1363 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms