Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH11P55287 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CDH11P55287 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH11P55287 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH11P55287 SLC7A15P-201ENST00000424028 1363 ntBASIC13.77□□□□□ -0.21
CDH11P55287 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH11P55287 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH11P55287 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH11P55287 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH11P55287 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH11P55287 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH11P55287 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH11P55287 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH11P55287 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH11P55287 AC025048.3-201ENST00000590609 569 ntBASIC13.77□□□□□ -0.21
CDH11P55287 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH11P55287 AC008494.3-201ENST00000606615 944 ntBASIC13.77□□□□□ -0.21
CDH11P55287 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH11P55287 AC005702.4-201ENST00000618393 416 ntBASIC13.77□□□□□ -0.21
CDH11P55287 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH11P55287 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH11P55287 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 LILRP1-201ENST00000444199 1370 ntBASIC13.76□□□□□ -0.21
CDH11P55287 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 GK-202ENST00000378941 458 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH11P55287 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 KRT18P64-201ENST00000434946 1219 ntBASIC13.76□□□□□ -0.21
CDH11P55287 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH11P55287 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.76□□□□□ -0.21
CDH11P55287 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.76□□□□□ -0.21
CDH11P55287 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.76□□□□□ -0.21
CDH11P55287 WASH4P-201ENST00000564273 1246 ntBASIC13.76□□□□□ -0.21
CDH11P55287 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
CDH11P55287 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH11P55287 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH11P55287 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDH11P55287 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH11P55287 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH11P55287 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH11P55287 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms