Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.77■□□□□ 0.11
RFC1P35251 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RFC1P35251 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RFC1P35251 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RFC1P35251 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RFC1P35251 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.77■□□□□ 0.11
RFC1P35251 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFC1P35251 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 AL138709.1-201ENST00000614840 1693 ntBASIC15.76■□□□□ 0.11
RFC1P35251 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC1P35251 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.76■□□□□ 0.11
RFC1P35251 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC1P35251 INE1-201ENST00000456273 945 ntBASIC15.76■□□□□ 0.11
RFC1P35251 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
RFC1P35251 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC1P35251 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RFC1P35251 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.76■□□□□ 0.11
RFC1P35251 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC1P35251 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC1P35251 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RFC1P35251 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC1P35251 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC1P35251 AC007389.4-201ENST00000454674 793 ntBASIC15.75■□□□□ 0.11
RFC1P35251 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC1P35251 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.75■□□□□ 0.11
RFC1P35251 AC106760.1-201ENST00000508690 800 ntBASIC15.75■□□□□ 0.11
RFC1P35251 AP001889.1-201ENST00000525414 633 ntBASIC15.75■□□□□ 0.11
RFC1P35251 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC1P35251 AC132938.2-201ENST00000579188 680 ntBASIC15.75■□□□□ 0.11
RFC1P35251 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 AL591163.1-201ENST00000641757 987 ntBASIC15.75■□□□□ 0.11
RFC1P35251 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC1P35251 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RFC1P35251 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC1P35251 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms