Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC6A4P31645 AC092135.3-201ENST00000624151 1846 ntBASIC15.25■□□□□ 0.03
SLC6A4P31645 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
SLC6A4P31645 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC6A4P31645 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A4P31645 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.25■□□□□ 0.03
SLC6A4P31645 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A4P31645 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A4P31645 AC044849.1-201ENST00000519737 1188 ntBASIC15.25■□□□□ 0.03
SLC6A4P31645 AC126915.1-201ENST00000522847 1038 ntBASIC15.25■□□□□ 0.03
SLC6A4P31645 AP001258.2-201ENST00000529891 490 ntBASIC15.25■□□□□ 0.03
SLC6A4P31645 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A4P31645 AC100827.2-201ENST00000563214 1194 ntBASIC15.25■□□□□ 0.03
SLC6A4P31645 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A4P31645 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC6A4P31645 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A4P31645 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A4P31645 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC6A4P31645 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 KRT8P29-201ENST00000420409 1371 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.24■□□□□ 0.03
SLC6A4P31645 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC6A4P31645 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SLC6A4P31645 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A4P31645 MTHFR-210ENST00000641407 2387 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A4P31645 NKAIN1P1-201ENST00000435754 582 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 KRT8P13-201ENST00000463294 1010 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 SERPINA13P-202ENST00000478994 924 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 AC021723.1-201ENST00000486306 515 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.24■□□□□ 0.03
SLC6A4P31645 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC6A4P31645 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A4P31645 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC6A4P31645 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC6A4P31645 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC6A4P31645 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A4P31645 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLC6A4P31645 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A4P31645 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A4P31645 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC6A4P31645 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SLC6A4P31645 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A4P31645 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A4P31645 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 FLJ16779-201ENST00000612722 7638 ntBASIC15.23■□□□□ 0.03
SLC6A4P31645 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SLC6A4P31645 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms