Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.58□□□□□ -0.08
EPHA3P29320 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 MIR3687-2-201ENST00000577708 61 ntBASIC14.58□□□□□ -0.08
EPHA3P29320 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 MIR3687-1-201ENST00000614492 61 ntBASIC14.58□□□□□ -0.08
EPHA3P29320 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 AL158212.4-201ENST00000624062 1286 ntBASIC14.58□□□□□ -0.08
EPHA3P29320 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.58□□□□□ -0.08
EPHA3P29320 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
EPHA3P29320 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
EPHA3P29320 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EPHA3P29320 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.58□□□□□ -0.08
EPHA3P29320 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
EPHA3P29320 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA3P29320 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA3P29320 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 KRT8P24-201ENST00000560290 1559 ntBASIC14.57□□□□□ -0.08
EPHA3P29320 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
EPHA3P29320 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.57□□□□□ -0.08
EPHA3P29320 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.57□□□□□ -0.08
EPHA3P29320 AL353779.1-201ENST00000434793 351 ntBASIC14.57□□□□□ -0.08
EPHA3P29320 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.57□□□□□ -0.08
EPHA3P29320 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.57□□□□□ -0.08
EPHA3P29320 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA3P29320 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
EPHA3P29320 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA3P29320 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.57□□□□□ -0.08
EPHA3P29320 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
EPHA3P29320 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
EPHA3P29320 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
EPHA3P29320 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.56□□□□□ -0.08
EPHA3P29320 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.56□□□□□ -0.08
EPHA3P29320 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.56□□□□□ -0.08
EPHA3P29320 AC087386.2-201ENST00000623212 4637 ntBASIC14.56□□□□□ -0.08
EPHA3P29320 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.56□□□□□ -0.08
EPHA3P29320 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
EPHA3P29320 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
EPHA3P29320 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EPHA3P29320 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
EPHA3P29320 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
EPHA3P29320 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms