Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CD58P19256 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CD58P19256 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CD58P19256 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD58P19256 AC020910.5-201ENST00000623668 1865 ntBASIC16.05■□□□□ 0.16
CD58P19256 INE2-201ENST00000630399 1874 ntBASIC16.05■□□□□ 0.16
CD58P19256 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 SALL4P5-201ENST00000419001 1760 ntBASIC16.05■□□□□ 0.16
CD58P19256 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.05■□□□□ 0.16
CD58P19256 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 AC026748.1-201ENST00000624349 3251 ntBASIC16.05■□□□□ 0.16
CD58P19256 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.05■□□□□ 0.16
CD58P19256 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CD58P19256 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 ANKRD19P-201ENST00000338192 862 ntBASIC16.05■□□□□ 0.16
CD58P19256 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.05■□□□□ 0.16
CD58P19256 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.05■□□□□ 0.16
CD58P19256 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.05■□□□□ 0.16
CD58P19256 KLF2P4-201ENST00000451959 1225 ntBASIC16.05■□□□□ 0.16
CD58P19256 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CD58P19256 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.05■□□□□ 0.16
CD58P19256 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 AC138466.3-201ENST00000619983 221 ntBASIC16.05■□□□□ 0.16
CD58P19256 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CD58P19256 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD58P19256 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD58P19256 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CD58P19256 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CD58P19256 AL354989.2-201ENST00000435838 1540 ntBASIC16.04■□□□□ 0.16
CD58P19256 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CD58P19256 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CD58P19256 MIR1909-201ENST00000411312 80 ntBASIC16.04■□□□□ 0.16
CD58P19256 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CD58P19256 CNN2P8-201ENST00000421872 913 ntBASIC16.04■□□□□ 0.16
CD58P19256 AC007969.1-201ENST00000433675 447 ntBASIC16.04■□□□□ 0.16
CD58P19256 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CD58P19256 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.04■□□□□ 0.16
CD58P19256 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.04■□□□□ 0.16
CD58P19256 AL391280.1-201ENST00000506969 1062 ntBASIC16.04■□□□□ 0.16
CD58P19256 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.04■□□□□ 0.16
CD58P19256 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.04■□□□□ 0.16
CD58P19256 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.04■□□□□ 0.16
CD58P19256 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CD58P19256 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD58P19256 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms