Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GHSR-202ENST00000427970 912 ntBASIC11.7□□□□□ -0.54
CD28P10747 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.7□□□□□ -0.54
CD28P10747 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC11.7□□□□□ -0.54
CD28P10747 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.7□□□□□ -0.54
CD28P10747 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.7□□□□□ -0.54
CD28P10747 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC11.7□□□□□ -0.54
CD28P10747 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC11.7□□□□□ -0.54
CD28P10747 AC138649.2-201ENST00000615886 705 ntBASIC11.7□□□□□ -0.54
CD28P10747 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC11.7□□□□□ -0.54
CD28P10747 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC11.7□□□□□ -0.54
CD28P10747 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
CD28P10747 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CD28P10747 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 AC126177.1-201ENST00000547829 2218 ntBASIC11.7□□□□□ -0.54
CD28P10747 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CD28P10747 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.69□□□□□ -0.54
CD28P10747 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.69□□□□□ -0.54
CD28P10747 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
CD28P10747 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CD28P10747 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC11.69□□□□□ -0.54
CD28P10747 AL662890.1-201ENST00000396818 632 ntBASIC11.69□□□□□ -0.54
CD28P10747 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC11.69□□□□□ -0.54
CD28P10747 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 RNMTL1P1-201ENST00000454103 560 ntBASIC11.69□□□□□ -0.54
CD28P10747 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CD28P10747 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 AL136301.1-201ENST00000615830 422 ntBASIC11.69□□□□□ -0.54
CD28P10747 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
CD28P10747 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.69□□□□□ -0.54
CD28P10747 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.69□□□□□ -0.54
CD28P10747 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CD28P10747 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.69□□□□□ -0.54
CD28P10747 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD28P10747 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CD28P10747 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD28P10747 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CD28P10747 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD28P10747 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.68□□□□□ -0.54
CD28P10747 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CD28P10747 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms