Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
RB1P06400 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RB1P06400 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RB1P06400 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 BCAS2P2-201ENST00000425064 674 ntBASIC15.61■□□□□ 0.09
RB1P06400 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.61■□□□□ 0.09
RB1P06400 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.61■□□□□ 0.09
RB1P06400 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.61■□□□□ 0.09
RB1P06400 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.61■□□□□ 0.09
RB1P06400 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.61■□□□□ 0.09
RB1P06400 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
RB1P06400 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.61■□□□□ 0.09
RB1P06400 FO393412.1-201ENST00000619841 382 ntBASIC15.61■□□□□ 0.09
RB1P06400 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
RB1P06400 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RB1P06400 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.61■□□□□ 0.09
RB1P06400 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.61■□□□□ 0.09
RB1P06400 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.6■□□□□ 0.09
RB1P06400 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.6■□□□□ 0.09
RB1P06400 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.6■□□□□ 0.09
RB1P06400 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 AC027237.1-201ENST00000560942 655 ntBASIC15.6■□□□□ 0.09
RB1P06400 C2orf69P1-201ENST00000563532 1093 ntBASIC15.6■□□□□ 0.09
RB1P06400 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.6■□□□□ 0.09
RB1P06400 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RB1P06400 AC138466.5-201ENST00000624002 808 ntBASIC15.6■□□□□ 0.09
RB1P06400 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.6■□□□□ 0.09
RB1P06400 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.6■□□□□ 0.09
RB1P06400 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 AP005117.1-202ENST00000581724 1908 ntBASIC15.6■□□□□ 0.09
RB1P06400 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms