Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
APPP05067 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.96■□□□□ 0.47
APPP05067 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
APPP05067 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
APPP05067 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.96■□□□□ 0.47
APPP05067 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.96■□□□□ 0.47
APPP05067 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.96■□□□□ 0.47
APPP05067 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.96■□□□□ 0.47
APPP05067 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.96■□□□□ 0.47
APPP05067 MESTP3-201ENST00000503460 968 ntBASIC17.96■□□□□ 0.47
APPP05067 COX5BP1-201ENST00000507622 393 ntBASIC17.96■□□□□ 0.47
APPP05067 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
APPP05067 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
APPP05067 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.96■□□□□ 0.47
APPP05067 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
APPP05067 AC010328.2-201ENST00000597698 1111 ntBASIC17.96■□□□□ 0.47
APPP05067 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
APPP05067 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
APPP05067 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
APPP05067 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.96■□□□□ 0.47
APPP05067 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.96■□□□□ 0.47
APPP05067 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.96■□□□□ 0.47
APPP05067 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
APPP05067 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.96■□□□□ 0.47
APPP05067 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APPP05067 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
APPP05067 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
APPP05067 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
APPP05067 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APPP05067 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APPP05067 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APPP05067 AC020910.5-201ENST00000623668 1865 ntBASIC17.95■□□□□ 0.46
APPP05067 INE2-201ENST00000630399 1874 ntBASIC17.95■□□□□ 0.46
APPP05067 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.95■□□□□ 0.46
APPP05067 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.95■□□□□ 0.46
APPP05067 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.95■□□□□ 0.46
APPP05067 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.95■□□□□ 0.46
APPP05067 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.95■□□□□ 0.46
APPP05067 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.95■□□□□ 0.46
APPP05067 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
APPP05067 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APPP05067 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APPP05067 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
APPP05067 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
APPP05067 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 CICP23-201ENST00000605013 2741 ntBASIC17.94■□□□□ 0.46
APPP05067 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.94■□□□□ 0.46
APPP05067 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 SBF1P1-201ENST00000444527 5631 ntBASIC17.94■□□□□ 0.46
APPP05067 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.94■□□□□ 0.46
APPP05067 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APPP05067 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
APPP05067 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms