Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.78■□□□□ 0.12
RTN3O95197 AC091271.1-201ENST00000611877 1162 ntBASIC15.78■□□□□ 0.12
RTN3O95197 AC244157.2-201ENST00000616239 1006 ntBASIC15.78■□□□□ 0.12
RTN3O95197 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.78■□□□□ 0.12
RTN3O95197 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 AC023157.3-201ENST00000619086 2088 ntBASIC15.78■□□□□ 0.12
RTN3O95197 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RTN3O95197 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 NORAD-201ENST00000565493 5339 ntBASIC15.78■□□□□ 0.12
RTN3O95197 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RTN3O95197 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN3O95197 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RTN3O95197 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN3O95197 LINC00528-201ENST00000600723 2160 ntBASIC15.77■□□□□ 0.12
RTN3O95197 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RTN3O95197 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RTN3O95197 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN3O95197 AC106881.1-201ENST00000605849 3329 ntBASIC15.77■□□□□ 0.12
RTN3O95197 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN3O95197 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RTN3O95197 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN3O95197 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
RTN3O95197 AC004945.1-201ENST00000416738 983 ntBASIC15.77■□□□□ 0.12
RTN3O95197 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.77■□□□□ 0.12
RTN3O95197 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RTN3O95197 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RTN3O95197 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.77■□□□□ 0.12
RTN3O95197 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.77■□□□□ 0.12
RTN3O95197 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.77■□□□□ 0.12
RTN3O95197 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.77■□□□□ 0.12
RTN3O95197 MIR4538-201ENST00000581377 78 ntBASIC15.77■□□□□ 0.12
RTN3O95197 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.77■□□□□ 0.12
RTN3O95197 AC138696.2-201ENST00000607376 223 ntBASIC15.77■□□□□ 0.12
RTN3O95197 MIR6869-201ENST00000619434 62 ntBASIC15.77■□□□□ 0.12
RTN3O95197 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN3O95197 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTN3O95197 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.77■□□□□ 0.11
RTN3O95197 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN3O95197 KRT8P4-201ENST00000509735 1454 ntBASIC15.77■□□□□ 0.11
RTN3O95197 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.77■□□□□ 0.11
RTN3O95197 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN3O95197 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.77■□□□□ 0.11
RTN3O95197 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
RTN3O95197 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.77■□□□□ 0.11
RTN3O95197 AL023775.1-201ENST00000454907 1746 ntBASIC15.77■□□□□ 0.11
RTN3O95197 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTN3O95197 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN3O95197 AC010327.5-201ENST00000586923 3061 ntBASIC15.76■□□□□ 0.11
RTN3O95197 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RTN3O95197 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN3O95197 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN3O95197 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 TLE1P1-201ENST00000422965 589 ntBASIC15.76■□□□□ 0.11
RTN3O95197 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.76■□□□□ 0.11
RTN3O95197 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.76■□□□□ 0.11
RTN3O95197 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RTN3O95197 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
RTN3O95197 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.76■□□□□ 0.11
RTN3O95197 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.76■□□□□ 0.11
RTN3O95197 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN3O95197 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN3O95197 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RTN3O95197 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RTN3O95197 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms