Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.5■□□□□ 0.07
LRCH4O75427 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.5■□□□□ 0.07
LRCH4O75427 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRCH4O75427 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCH4O75427 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRCH4O75427 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.49■□□□□ 0.07
LRCH4O75427 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 AL161772.1-201ENST00000610494 4412 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.49■□□□□ 0.07
LRCH4O75427 FAM197Y7-201ENST00000432892 766 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 C2orf27AP3-201ENST00000434123 579 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.49■□□□□ 0.07
LRCH4O75427 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.49■□□□□ 0.07
LRCH4O75427 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.49■□□□□ 0.07
LRCH4O75427 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.49■□□□□ 0.07
LRCH4O75427 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 BX088702.1-201ENST00000610784 235 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 AC244669.2-201ENST00000612320 853 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 AL354718.3-201ENST00000616414 581 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 CR382287.1-201ENST00000623954 586 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.49■□□□□ 0.07
LRCH4O75427 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
LRCH4O75427 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 AC015688.4-201ENST00000580780 1647 ntBASIC15.49■□□□□ 0.07
LRCH4O75427 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LRCH4O75427 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LRCH4O75427 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCH4O75427 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.48■□□□□ 0.07
LRCH4O75427 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 NME2P1-201ENST00000426182 414 ntBASIC15.48■□□□□ 0.07
LRCH4O75427 ALG3P1-201ENST00000508806 1114 ntBASIC15.48■□□□□ 0.07
LRCH4O75427 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.48■□□□□ 0.07
LRCH4O75427 AC005225.4-201ENST00000557330 545 ntBASIC15.48■□□□□ 0.07
LRCH4O75427 AC103988.2-201ENST00000561804 725 ntBASIC15.48■□□□□ 0.07
LRCH4O75427 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.48■□□□□ 0.07
LRCH4O75427 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRCH4O75427 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms