Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH16O75309 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH16O75309 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH16O75309 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH16O75309 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 CICP16-201ENST00000502609 2813 ntBASIC15.14■□□□□ 0.01
CDH16O75309 RN7SL832P-201ENST00000607781 1756 ntBASIC15.14■□□□□ 0.01
CDH16O75309 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH16O75309 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 AL645937.2-201ENST00000396808 931 ntBASIC15.14■□□□□ 0.01
CDH16O75309 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH16O75309 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH16O75309 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 AC009093.7-201ENST00000623853 1223 ntBASIC15.14■□□□□ 0.01
CDH16O75309 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH16O75309 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 KRT8P14-201ENST00000414254 1442 ntBASIC15.14■□□□□ 0.01
CDH16O75309 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 DGCR9-201ENST00000609630 2415 ntBASIC15.14■□□□□ 0.01
CDH16O75309 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH16O75309 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 AC023794.5-201ENST00000564380 2157 ntBASIC15.14■□□□□ 0.01
CDH16O75309 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH16O75309 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH16O75309 AL158070.2-201ENST00000623713 1621 ntBASIC15.14■□□□□ 0.01
CDH16O75309 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 AC011840.2-201ENST00000563063 1520 ntBASIC15.13■□□□□ 0.01
CDH16O75309 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH16O75309 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH16O75309 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.13■□□□□ 0.01
CDH16O75309 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH16O75309 AL512361.1-201ENST00000554200 418 ntBASIC15.13■□□□□ 0.01
CDH16O75309 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CDH16O75309 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH16O75309 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH16O75309 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 AC138969.2-201ENST00000532739 9932 ntBASIC15.13■□□□□ 0.01
CDH16O75309 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH16O75309 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH16O75309 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms