Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 GOLGA2P4-201ENST00000441462 777 ntBASIC14.42□□□□□ -0.1
CPNE3O75131 HOMER2P2-201ENST00000451621 847 ntBASIC14.42□□□□□ -0.1
CPNE3O75131 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE3O75131 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CPNE3O75131 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.42□□□□□ -0.1
CPNE3O75131 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CPNE3O75131 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 AC244093.1-201ENST00000610837 814 ntBASIC14.42□□□□□ -0.1
CPNE3O75131 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.42□□□□□ -0.1
CPNE3O75131 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.42□□□□□ -0.1
CPNE3O75131 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE3O75131 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE3O75131 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.42□□□□□ -0.1
CPNE3O75131 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPNE3O75131 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPNE3O75131 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.42□□□□□ -0.1
CPNE3O75131 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CPNE3O75131 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE3O75131 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE3O75131 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 EIF3FP3-201ENST00000434851 1086 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 FAM8A4P-201ENST00000435433 1213 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 AC006033.1-201ENST00000440505 426 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 CNN2P10-201ENST00000443067 918 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE3O75131 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.41□□□□□ -0.1
CPNE3O75131 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.41□□□□□ -0.1
CPNE3O75131 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 AC107918.4-201ENST00000641966 3141 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CPNE3O75131 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CPNE3O75131 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPNE3O75131 AC007292.2-201ENST00000593524 1812 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 AC015818.8-201ENST00000587907 1519 ntBASIC14.41□□□□□ -0.1
CPNE3O75131 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms