Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FOXN3O00409 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
FOXN3O00409 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
FOXN3O00409 AL596325.1-201ENST00000563991 1082 ntBASIC15.97■□□□□ 0.15
FOXN3O00409 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
FOXN3O00409 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
FOXN3O00409 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FOXN3O00409 AC027307.3-201ENST00000594262 1100 ntBASIC15.97■□□□□ 0.15
FOXN3O00409 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
FOXN3O00409 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
FOXN3O00409 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXN3O00409 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
FOXN3O00409 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
FOXN3O00409 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXN3O00409 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXN3O00409 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FOXN3O00409 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXN3O00409 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
FOXN3O00409 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 FKBP4P6-201ENST00000457486 1332 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXN3O00409 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
FOXN3O00409 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.96■□□□□ 0.15
FOXN3O00409 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXN3O00409 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 AC007389.4-201ENST00000454674 793 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 RN7SL692P-201ENST00000464677 288 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 AC011495.1-201ENST00000498085 584 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 AL391280.1-201ENST00000506969 1062 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 GCOM2-201ENST00000509133 1104 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.96■□□□□ 0.15
FOXN3O00409 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXN3O00409 AC132938.2-201ENST00000579188 680 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 AC132938.4-201ENST00000623835 848 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.96■□□□□ 0.15
FOXN3O00409 AL591163.1-201ENST00000641757 987 ntBASIC15.96■□□□□ 0.15
FOXN3O00409 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
FOXN3O00409 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
FOXN3O00409 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
FOXN3O00409 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXN3O00409 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXN3O00409 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXN3O00409 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
FOXN3O00409 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXN3O00409 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
FOXN3O00409 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXN3O00409 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
FOXN3O00409 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FOXN3O00409 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 AC092933.1-201ENST00000393644 945 ntBASIC15.95■□□□□ 0.14
FOXN3O00409 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 INE1-201ENST00000456273 945 ntBASIC15.95■□□□□ 0.14
FOXN3O00409 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.95■□□□□ 0.14
FOXN3O00409 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXN3O00409 AC025279.2-201ENST00000569730 653 ntBASIC15.95■□□□□ 0.14
FOXN3O00409 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.95■□□□□ 0.14
FOXN3O00409 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.95■□□□□ 0.14
FOXN3O00409 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXN3O00409 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
FOXN3O00409 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXN3O00409 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXN3O00409 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 MYADML-201ENST00000474610 2147 ntBASIC15.95■□□□□ 0.14
FOXN3O00409 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXN3O00409 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FOXN3O00409 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms