Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AGGF1P1-201ENST00000509500 2073 ntBASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHANK2Q9UPX8 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC21.58■■□□□ 1.05
SHANK2Q9UPX8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AC092384.3-202ENST00000564646 2873 ntBASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AC126177.1-201ENST00000547829 2218 ntBASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 PYY2-201ENST00000315776 282 ntBASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 AL133467.4-201ENST00000602953 725 ntBASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 IL9RP3-201ENST00000442856 1674 ntBASIC21.58■■□□□ 1.04
SHANK2Q9UPX8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 CELP-201ENST00000411440 1249 ntTSL 5 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms