Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AC026410.3-201ENST00000514280 936 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AC025678.2-201ENST00000562061 970 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CLK3P2-201ENST00000427566 1453 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 PTENP1-202ENST00000532280 3996 ntBASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE2Q9NRR3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 C8orf49-201ENST00000525043 1968 ntBASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 KRT18P13-201ENST00000400056 1290 ntBASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC107890.1-201ENST00000422478 521 ntBASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC015911.4-201ENST00000588022 1070 ntBASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC107373.2-201ENST00000607735 490 ntBASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AL391069.4-201ENST00000609583 481 ntBASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE2Q9NRR3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms