Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 AL359183.1-201ENST00000623796 2132 ntBASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SDHAF3Q9NRP4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SDHAF3Q9NRP4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ARSEP1-201ENST00000420443 635 ntBASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 CNN2P8-201ENST00000421872 913 ntBASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 AC007969.1-201ENST00000433675 447 ntBASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 FTLP10-202ENST00000505798 471 ntBASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 GNRHR2-203ENST00000581100 1187 ntBASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 RHOXF1P1-202ENST00000635473 501 ntBASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.77□□□□□ -0.21
SDHAF3Q9NRP4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SDHAF3Q9NRP4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms