Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.81□□□□□ -0.04
SSU72Q9NP77 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 MEIS3P1-201ENST00000495167 958 ntBASIC14.81□□□□□ -0.04
SSU72Q9NP77 KRT18P58-201ENST00000527480 1120 ntBASIC14.81□□□□□ -0.04
SSU72Q9NP77 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 AC131206.1-201ENST00000538078 1211 ntBASIC14.81□□□□□ -0.04
SSU72Q9NP77 AC069262.1-201ENST00000539058 672 ntBASIC14.81□□□□□ -0.04
SSU72Q9NP77 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 MIR4469-201ENST00000583919 79 ntBASIC14.81□□□□□ -0.04
SSU72Q9NP77 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSU72Q9NP77 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SSU72Q9NP77 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AL356585.2-201ENST00000625078 2396 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC114501.2-201ENST00000439631 535 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC026434.2-201ENST00000506094 1078 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC044860.1-202ENST00000559481 777 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC093813.1-201ENST00000605066 256 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 AL596442.2-201ENST00000610240 980 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC087499.5-201ENST00000452760 1342 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 TUBB8P4-201ENST00000511806 1324 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC114271.1-201ENST00000612689 2813 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms