Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 CRYGEP-201ENST00000412192 528 ntBASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 AC007064.4-201ENST00000637740 555 ntBASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 AC092053.3-201ENST00000641308 4975 ntBASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SMIM3Q9BZL3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 AC114271.1-201ENST00000612689 2813 ntBASIC12.27□□□□□ -0.44
SMIM3Q9BZL3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 HNRNPDP1-201ENST00000439535 754 ntBASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC096734.2-201ENST00000562054 433 ntBASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SMIM3Q9BZL3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms