Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CDKN2A-AS1-201ENST00000441769 823 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RPS4XP4-201ENST00000443195 763 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC022364.2-201ENST00000457963 554 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 NUTF2P5-201ENST00000475013 379 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC008629.2-201ENST00000503783 483 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MTND6P16-201ENST00000504006 520 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 HNRNPKP5-201ENST00000515300 253 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SNORA19.2-201ENST00000516013 114 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PTK2-241ENST00000522950 548 ntTSL 4 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AL359397.2-201ENST00000555403 446 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC024361.1-201ENST00000572594 642 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC090616.6-201ENST00000582640 721 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC005034.4-201ENST00000603612 899 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AP006545.2-201ENST00000607091 461 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC012414.7-202ENST00000622705 1090 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PCMTD1P7-201ENST00000634506 357 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 TTC39DP-201ENST00000416781 1688 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 TAB3P1-202ENST00000452645 1634 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AGBL1-AS1-202ENST00000564487 1642 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 KRT8P20-201ENST00000423953 1409 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 CROCCP3-202ENST00000420820 1947 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SYN3-201ENST00000332840 972 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-845P-201ENST00000362578 103 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SNORD81.2-201ENST00000365153 76 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SNORA63.7-201ENST00000365579 123 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-878P-201ENST00000384578 110 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-757P-201ENST00000410334 100 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AL773545.3-201ENST00000414297 706 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MAPK6PS6-201ENST00000420752 1053 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL4P4-201ENST00000422486 1284 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 TIMM9P3-201ENST00000428659 274 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AL032821.1-201ENST00000430895 581 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms