Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 AL136172.1-201ENST00000598590 1394 ntBASIC12.87□□□□□ -0.35
GFI1Q99684 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.87□□□□□ -0.35
GFI1Q99684 AC114501.2-201ENST00000439631 535 ntBASIC12.87□□□□□ -0.35
GFI1Q99684 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.87□□□□□ -0.35
GFI1Q99684 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 TIMM17BP1-201ENST00000545713 516 ntBASIC12.87□□□□□ -0.35
GFI1Q99684 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.87□□□□□ -0.35
GFI1Q99684 AC138761.1-201ENST00000584393 385 ntBASIC12.87□□□□□ -0.35
GFI1Q99684 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.87□□□□□ -0.35
GFI1Q99684 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.87□□□□□ -0.35
GFI1Q99684 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.87□□□□□ -0.35
GFI1Q99684 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
GFI1Q99684 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 AC087499.5-201ENST00000452760 1342 ntBASIC12.87□□□□□ -0.35
GFI1Q99684 KRT8P35-201ENST00000483942 1338 ntBASIC12.87□□□□□ -0.35
GFI1Q99684 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFI1Q99684 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.86□□□□□ -0.35
GFI1Q99684 SALL4P5-201ENST00000419001 1760 ntBASIC12.86□□□□□ -0.35
GFI1Q99684 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
GFI1Q99684 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.86□□□□□ -0.35
GFI1Q99684 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.86□□□□□ -0.35
GFI1Q99684 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.86□□□□□ -0.35
GFI1Q99684 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 MEIS3P1-201ENST00000495167 958 ntBASIC12.86□□□□□ -0.35
GFI1Q99684 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.86□□□□□ -0.35
GFI1Q99684 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.86□□□□□ -0.35
GFI1Q99684 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.86□□□□□ -0.35
GFI1Q99684 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
GFI1Q99684 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 AL662799.1-202ENST00000614205 422 ntBASIC12.86□□□□□ -0.35
GFI1Q99684 AC073592.8-201ENST00000624126 511 ntBASIC12.86□□□□□ -0.35
GFI1Q99684 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.86□□□□□ -0.35
GFI1Q99684 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFI1Q99684 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms