Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 PPT1-213ENST00000641319 2388 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC004945.1-201ENST00000416738 983 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 KRT18P64-201ENST00000434946 1219 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CEND1P1-201ENST00000451006 455 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC069335.1-201ENST00000489972 472 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 RN7SL828P-201ENST00000607615 303 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC020910.6-201ENST00000623084 1459 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC105206.1-202ENST00000314927 2368 ntBASIC12.18□□□□□ -0.46
RAB40CQ96S21 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RAB40CQ96S21 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RAB40CQ96S21 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 TOMM22P5-201ENST00000416399 439 ntBASIC12.17□□□□□ -0.46
RAB40CQ96S21 BX842568.4-201ENST00000421222 227 ntBASIC12.17□□□□□ -0.46
RAB40CQ96S21 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 SERBP1P3-201ENST00000459980 809 ntBASIC12.17□□□□□ -0.46
RAB40CQ96S21 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 AL133215.2-201ENST00000609242 977 ntBASIC12.17□□□□□ -0.46
RAB40CQ96S21 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms