Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NR1H4Q96RI1 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 MIR1199-201ENST00000621445 119 ntBASIC14.13□□□□□ -0.15
NR1H4Q96RI1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 AC090643.2-201ENST00000623442 2029 ntBASIC14.13□□□□□ -0.15
NR1H4Q96RI1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H4Q96RI1 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 MKRN5P-201ENST00000445263 1467 ntBASIC14.12□□□□□ -0.15
NR1H4Q96RI1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 HMGA1P7-201ENST00000406908 502 ntBASIC14.12□□□□□ -0.15
NR1H4Q96RI1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms