Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NLRP3Q96P20 AC011270.2-201ENST00000624293 2550 ntBASIC18.28■□□□□ 0.52
NLRP3Q96P20 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.28■□□□□ 0.52
NLRP3Q96P20 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 AHCYP4-201ENST00000419201 1315 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 KRT18P36-201ENST00000411618 1276 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 BANF1P3-201ENST00000412556 261 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 AP000358.1-201ENST00000456260 156 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 RN7SL8P-201ENST00000461771 266 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 AP002803.1-201ENST00000528836 498 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 AL031713.1-201ENST00000564813 661 ntBASIC18.27■□□□□ 0.52
NLRP3Q96P20 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
NLRP3Q96P20 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NLRP3Q96P20 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NLRP3Q96P20 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.27■□□□□ 0.51
NLRP3Q96P20 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NLRP3Q96P20 LINC01101-201ENST00000622953 1884 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 RPL7P35-201ENST00000446943 740 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 MIR6842-201ENST00000612539 65 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 AC242376.2-201ENST00000619355 883 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 YRDCP1-201ENST00000621419 643 ntBASIC18.26■□□□□ 0.51
NLRP3Q96P20 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NLRP3Q96P20 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.26■□□□□ 0.51
NLRP3Q96P20 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NLRP3Q96P20 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NLRP3Q96P20 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NLRP3Q96P20 KRT18P9-201ENST00000604826 1300 ntBASIC18.25■□□□□ 0.51
NLRP3Q96P20 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NLRP3Q96P20 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NLRP3Q96P20 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.25■□□□□ 0.51
NLRP3Q96P20 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NLRP3Q96P20 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.25■□□□□ 0.51
NLRP3Q96P20 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms