Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC7Q96M83 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC7Q96M83 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.66■□□□□ 0.9
CCDC7Q96M83 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC104982.3-201ENST00000581995 514 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 RN7SL713P-201ENST00000582127 302 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AL096828.3-201ENST00000615354 462 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC015967.2-201ENST00000624092 234 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC006435.4-201ENST00000625037 234 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 AL356737.1-201ENST00000634391 234 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC7Q96M83 AC139749.1-202ENST00000617529 3139 ntBASIC20.65■□□□□ 0.9
CCDC7Q96M83 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC7Q96M83 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CCDC7Q96M83 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC7Q96M83 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC7Q96M83 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC7Q96M83 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC7Q96M83 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC7Q96M83 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC7Q96M83 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 KHSRPP1-201ENST00000427983 1768 ntBASIC20.64■□□□□ 0.89
CCDC7Q96M83 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.64■□□□□ 0.89
CCDC7Q96M83 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 AC105129.2-201ENST00000559536 390 ntBASIC20.64■□□□□ 0.89
CCDC7Q96M83 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC7Q96M83 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC7Q96M83 SNX18-202ENST00000343017 3140 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms