Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AL596325.1-201ENST00000563991 1082 ntBASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC233724.13-201ENST00000598383 410 ntBASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AL590440.2-201ENST00000641973 1595 ntBASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC215219.1-201ENST00000400706 1817 ntBASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 CNN2P8-201ENST00000421872 913 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 PUDPP3-201ENST00000445368 636 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 RN7SL692P-201ENST00000464677 288 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 AL022328.1-201ENST00000610050 478 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 CU639417.3-201ENST00000624240 1404 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 RN7SL832P-201ENST00000607781 1756 ntBASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDLIM5Q96HC4 AC041040.2-201ENST00000622926 2899 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms