Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 CYP46A4P-201ENST00000414953 267 ntBASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC022217.1-201ENST00000521069 738 ntBASIC16.16■□□□□ 0.18
PGBD4Q96DM1 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 MIR3619-201ENST00000579667 83 ntBASIC16.16■□□□□ 0.18
PGBD4Q96DM1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 E2F3P2-201ENST00000447755 1422 ntBASIC16.16■□□□□ 0.18
PGBD4Q96DM1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PGBD4Q96DM1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.15■□□□□ 0.18
PGBD4Q96DM1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 AC012441.2-201ENST00000444843 739 ntBASIC16.15■□□□□ 0.18
PGBD4Q96DM1 Z97180.1-201ENST00000445173 988 ntBASIC16.15■□□□□ 0.18
PGBD4Q96DM1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 ALG3P1-201ENST00000508806 1114 ntBASIC16.15■□□□□ 0.18
PGBD4Q96DM1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.15■□□□□ 0.18
PGBD4Q96DM1 AC138627.1-207ENST00000641560 1006 ntBASIC16.15■□□□□ 0.18
PGBD4Q96DM1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PGBD4Q96DM1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
PGBD4Q96DM1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AL133466.1-201ENST00000447582 150 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 SPTLC1P5-201ENST00000450718 252 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AC104073.2-201ENST00000453737 312 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 RHOQP1-201ENST00000555758 579 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 MIR4783-201ENST00000580343 82 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AC132192.2-201ENST00000596206 1147 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 CU633904.3-201ENST00000624042 1029 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AC068587.8-201ENST00000641239 219 ntBASIC16.14■□□□□ 0.17
PGBD4Q96DM1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms