Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CNN2P3-201ENST00000450201 906 ntBASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC025181.2-201ENST00000606994 802 ntBASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AL136317.3-201ENST00000618497 906 ntBASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC138969.3-201ENST00000546612 1459 ntBASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC138932.2-201ENST00000548268 1459 ntBASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 AC126755.4-201ENST00000549796 1459 ntBASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIML2Q8N7C3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AP000845.1-201ENST00000581677 2131 ntBASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 SDHAP3-202ENST00000515467 728 ntBASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 AL121723.1-201ENST00000445194 1519 ntBASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIML2Q8N7C3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 PPT1-213ENST00000641319 2388 ntBASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 KRT18P64-201ENST00000434946 1219 ntBASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.55□□□□□ -0.08
TRIML2Q8N7C3 AC092865.5-201ENST00000545435 363 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms